2024年

​

Aulia Fitri Rhamadianti, Takayuki Abe, Tomohisa Tanaka, Chikako Ono, Hisashi Katayama, Yoshiteru Makino, Lin Deng, Chieko Matsui, Koji Moriishi, Fumi Shima, Yoshiharu Matsuura, and Ikuo Shoji. 

SARS-CoV-2 papain-like protease inhibits ISGylation of the viral nucleocapsid protein to evade host anti-viral immunity.

J Virol. 2024 Sep 17;98(9):e0085524.

​

2023年

​

Lin Deng, Solichin MR, Adyaksa DNM, Septianastiti MA, Suwardan GNR, Chieko Matsui, Takayuki Abe, and Ikuo Shoji. 

Cellular release of infectious hepatitis C virus particles via endosomal pathways.

Viruses. 2023, 15(12) : 2430.

​​

Watanabe K, Oka T, Takagi H, Anisimov S, Yamashita SI, Katsuragi Y, Takahashi M, Higuchi M, Kanki T, Saitoh A, Fujii M.
Myeloid-associated differentiation marker is an essential host factor for human parechovirus PeV-A3 entry.
Nat Commun. 2023 Mar 31;14(1):1817 (2023).

​

Takayuki Abe, Yuki Marutani, Lin Deng, Chieko Matsui, Masayoshi Fukasawa, Ryosuke Suzuki, Takaji Wakita, Yoshiharu Matsuura, and Ikuo Shoji. 

Hepatitis C virus disrupts annexin 5-mediated occluding integrity through downregulation of PKC-alpha and PKC-eta expression, thereby promoting viral propagation.

J Virol. 2023, 97(6) : e0065523.

​

Laura Navika Yamani, Takako Utsumi, Yen Hai Doan, Yoshiki Fujii, Zayyin Dinana, Rury Mega Wahyuni, Emily Gunawan, Soegeng Soegijanto, Alpha Fardah Athiyyah, Subijanto Marto Sudarmo, Reza Gunadi Ranuh, Andy Darma, Soetjipto, Juniastuti, Rheza Gandi Bawono, Chieko Matsui, Lin Deng, Takayuki Abe, Hiroyuki Shimizu, Koji Ishii, Kazuhiko Katayama, Maria Inge Lusida, and Ikuo Shoji. 

Complete genome analyses of G12P[8] rotavirus strains from hospitalized children in Surabaya, Indonesia, 2017-2018.

J Med Virol. 2023 95(2) : e28485.

​

Adi Ariffianto, Deng Lin, Takayuki Abe, Chieko Matsui, Masahiko Ito, Akihide Ryo, Hussein Hassan Aly, Koichi Watashi, Tetsuro Suzuki, Masashi Mizokami, Yoshiharu Matsuura, and Ikuo Shoji.

Oxidative stress sensor Keap1 recognizes HBx protein to activate the Nrf2/ARE signaling pathway, thereby inhibiting hepatitis B virus replication.

J Virol. 2023, 97(10) : e0128723.

​

2022年

​

Deng Lin, Yujiao Liang, Adi Ariffianto, Chieko Matsui, Takayuki Abe, Masamichi Muramatsu, Takaji Wakita, Masatoshi Maki, Hideki Shibata, and Ikuo Shoji. 

Hepatitis C virus-induced ROS/JNK signaling pathway activates the E3 ubiquitin ligase Itch to promote the release of HCV particles via polyubiquitylation of VPS4A. 

J. Virol. 2022, 96(6) : e0181121.

​​

Takahashi M, Kitaura H, Kakita A, Kakihana T, Katsuragi Y, Onodera O, Iwakura Y, Nawa H, Komatsu M, Fujii M.
USP10 inhibits aberrant cytoplasmic aggregation of TDP-43 by promoting stress granule clearance.
Mol Cell Biol. Jan 10:MCB0039321. (2022).

​

Putu Yuliandari, Chieko Matsui, Lin Deng, Takayuki Abe, Hiroyuki Mori, Shuhei Taguwa, Chikako Ono, Takasuke Fukuhara, Yoshiharu Matsuura, and Ikuo Shoji. 

Hepatitis C virus NS5A protein promotes the lysosomal degradation of diacylglycerol O-acyltransferase I (DGAI1) via endosomal microautophagy.

Autophagy Reports. 2022, 1(1) : 264-285.

 

2021年

​

Chieko Matsui, Yuliandari Putu, Deng Lin, Takayuki Abe, and Ikuo Shoji. 

The role of chaperone-mediated autophagy in hepatitis C virus-induced pathogenesis. 

Front Cell Infect Microbiol. 2021, 11: 796664.

​​

Sango J, Kakihana T, Takahashi M, Katsuragi Y, Anisimov S, Komatsu M, Fujii M.
USP10 inhibits the dopamine-induced reactive oxygen species-dependent apoptosis of neuronal cells by stimulating the antioxidant Nrf2 activity.
J Biol Chem., Nov 24;298(1):101448. (2021).

​

Kakihana T, Takahashi M, Katsuragi Y, Yamashita SI, Sango J, Kanki T, Onodera O, Fujii M.
The optineurin/TIA1 pathway inhibits aberrant stress granule formation and reduces ubiquitinated TDP-43.
iScience. 24(7):102733 (2021).

​

Rheza Gandi Bawano, Takayuki Abe, Qu Mengting, Daisuke Kuroki, Lin Deng, Chieko Matsui, Akihide Ryo, Tetsuro Suzuki, Yoshiharu Matsuura, Masaya Sugiyama, Masashi Mizokami, Kunitada Shimotohno, and Ikuo Shoji. 

HERC5 E3 ligase mediates ISGylation of hepatitis B virus X protein to promote viral replication.

J. Gen.Virol. 2021, 102(10).

​

Takako Utsumi, Maria Inge Lusida, Zayyin Dinana, Rury Mega Wahyuni, Soegeng Soegijanto, Soetjipto, Alpha Fardah Athiyyah, Subijanto Marto Sudarmo, Reza Gunadi Ranuh, Andy Darma, Juniastuti, Laura Navika Yamani, Yen Hai Doan, Hiroyuki Shimizu, Koji Ishii, Chieko Matsui, Lin Deng, Takayuki Abe, Kazuhiko Katayama, and Ikuo Shoji.

Molecular epidemiology and genetic diversity of norovirus infection in children hospitalized with acute gastroenteritis in East Java, Indonesia in 2015-2019.

Infect Genet Evol. 2021 88 : 104703.

​

2020年

​

Takayuki Abe, Nanae Minami, Rheza Gandi Bawano, Chieko Matsui, Lin Deng, Takasuke Fukuhara, Yoshiharu Matsuura, and Ikuo Shoji. 

ISGylation of hepatitis C virus NS5A protein promotes viral RNA replication via recruitment of cyclophilin A.

J. Virol. 2020, 94: e00532-20.

​

2019年

​

Takayuki Abe, and Sagi D. Shapira. 

Negative regulation of cytosolic sensing of DNA.

Int Rev Cell Mol Biol, 2019, 344: 91-115.

 

Anisimov S, Takahashi M, Kakihana T, Katsuragi Y, Kitaura H, Zhang L, Kakita A, Fujii M.
G3BP1 inhibits ubiquitinated protein aggregations induced by p62 and USP10.
Sci Rep. 9:12896. (2019).

​

Piatnitskaia S, Takahashi M, Kitaura H, Katsuragi Y, Kakihana T, Zhang L, Kakita A, Iwakura Y, Nawa H, Miura T, Ikeuchi T, Hara T, Fujii M.
USP10 is a critical factor for Tau-positive stress granule formation in neuronal cells.
Sci Rep. 9(1):10591. (2019).

​

Takayuki Abe, Yuki Marutani, and Ikuo Shoji. 

Cytosolic DNA-sensing immune response and viral infection.

Microbiol & Immunol, 2019, 63: 51-64.

​

Lin Deng, Xiang Gan, Masahiko Ito, Ming Chen, Hussein H. Aly, Chieko Matsui, Takayuki Abe, Koichi Watashi,Takaji Wakita, Tetsuro Suzuki, Toru Okamoto, Yoshiharu Matsuura, Masashi Mizokami, Ikuo Shoji, and Hak Hotta. 

Peroxiredoxin 1, a novel HBx-interacting protein, interacts with exsome component 5 and negatively regulates hepatitis B virus (HBV) propagation through degradation of HBV RNA.

J. Virol. 2019, 93: e02203-18.

​

Alpha Fardah Athiyyah, Takako Utsumi, Rury Mega Wahyuni, Zayyin Dinana, Laura Navika Yamani, Soetjipto, Subijanto Marto Sudarmo, Reza Gunadi Ranuh, Andy Darma, Juniastuti, Dadik Raharjo, Chieko Matsui, Lin Deng, Takayuki Abe, Yen Hai Doan, Yoshiki Fujii, Hiroyuki Shimizu, Kazuhiko Katayama, Maria Inge Lusida, and Ikuo Shoji. 

Molecular epidemiology and clinical features of rotavirus infection among pediatric patients in East Java, Indonesia during 2015-2018: Dynamic changes in rotavirus genotypes from equine-like G3 to typical human G1/G3.

Front Microbiol. 2019 10 : 940.

​

2018年

​

Takako Utsumi, Rury Mega Wahyuni, Yen Hai Doan, Zayyin Dinana, Subijanto Marto Sudarmo, Yoshiki Fujii, Juniastuti, Laura Navika Yamani, Chieko Matsui, Lin Deng, Takayuki Abe, Soetjipto, Maria Inge Lusida, Koji Ishii, Hiroyuki Shimizu, Kazuhiko Katayama, and Ikuo Shoji. 

Equine-like G3 rotavirus strains as predominant strains among children in Indonesia in 2015-2016.

Infect Genet Evol. 2018, 61 : 224-228.

​​

Takahashi M, Kitaura H, Kakita A, Kakihana T, Katsuragi Y, Nameta M, Zhang L, Iwakura Y, Nawa H, Higuchi M, Komatsu M, Fujii M.
USP10 Is a Driver of Ubiquitinated Protein Aggregation and Aggresome Formation to Inhibit Apoptosis.
iScience. 30;9:433-450, (2018).

​

Chieko Matsui, Lin Deng, Nanae Minami, Takayuki Abe, Kazuhiko Koike, and Ikuo Shoji. 

Hepatitis C virus NS5A protein promotes the lysosomal degradation of hepatocyte nuclear factor 1a via chaperone-mediated autophagy.

J Virol. 2018 92(13) : e00639-18.

​

2017年

​

Takako Utsumi, Maria Inge Lusida, Zayyin Dinana, Rury Mega Wahyuni, Laura Navika Yamani, Juniastuti, Soetjipto, Chieko Matsui, Lin Deng, Takayuki Abe, Yen Hai Doan, Yoshiki Fujii, Hirokazu Kimura, Kazuhiko Katayama, and Ikuo Shoji. 

Occurrence of norovirus infection in an asymptomatic population in Indonesia.

Infect Genet Evol. 2017 55 : 1-7.

​

Nanae Minami, Takayuki Abe, Lin Deng, Chieko Matsui, Takasuke Fukuhara, Yoshiharu Matsuura, and Ikuo Shoji.

Unconjugated interferon-stimulated gene 15 specifically interacts with the hepatitis C virus NS5A protein via domain I.

Microbiol Immunol. 2017 61(7) : 287-292.

​

Takayuki Abe, Albert Lee, Ramaswami Sitharam, Jordan Kesner, Raul Rabadan, and Sagi D. Shapira. 

Germ-cell-specific inflammasome component NLRP14 negatively regulates cytosolic nucleic acid sensing to promote fertilization.

Immunity. 2017 46(4) : 621-634.

​

2016年

​

Ryoichi Shima, Tian Cheng Li, Yutaka Sendai, Chikako Kataoka, Yoshio Mori, Takayuki Abe, Naokazu Takeda, Toru Okamoto, and Yoshiharu Matsuura. 

Production of hepatitis E virus-like particles presenting multiple foreign epitopes by co-infection of recombinant baculoviruses. 

Sci Rep. 2016 6 : 21638.

​

Higuchi M, Kawamura H, Matsuki H, Hara T, Takahashi M, Saito S, Saito K, Jiang S, Naito M, Kiyonari H, Fujii M.
USP10 Is an Essential Deubiquitinase for Hematopoiesis and Inhibits Apoptosis of Long-Term Hematopoietic Stem Cells.
Stem Cell Reports, 7(6):1116-1129, (2016).

​

2014年

​

Takayuki Abe, and Glen N. Barber. 

Cytosolic-DNA-mediated, STING-dependent proinflammatory gene induction necessitates canonical NF-kB activation through TBK1.

J Virol. 2014 88(11) : 5328-5341.

​

Chikako Ono, Akinori Ninomiya, Satomi Yamamoto, Takayuki Abe, Xiauyu Wen, Takasuke Fukuhara, Miwa Sasai, Masahiro Yamamoto, Tatsuya Saitoh, Takashi Satoh, Taro Kawai, Ken J. Ishii, Shizuo Akira, Toru Okamoto, and Yoshiharu Matsuura. 

Innate immune response induced by baculovirus attenuates transgene expression in mammalian cells. 

J Virol. 2014 88(4) : 2157-2167.

​

2013年

​

Lokesh P. Tripathi, Hiroto Kambara, Yi-An Chen, Yorihiro Nishimura, Kohji Moriishi, Toru Okamoto, Eiji Morita, Takayuki Abe, Yoshio Mori, Yoshiharu Matsuura, and Kenji Mizuguchi. 

Understanding the biological context of NS5A-host interactions in HCV infection: a network-based approach. 

J Proteome Res. 2013 12(6) : 2537-2551.

​​

Takahashi M, Higuchi M, Makokha GN, Matsuki H, Yoshita M, Tanaka Y, Fujii M.
HTLV-1 Tax oncoprotein stimulates ROS production and apoptosis in T-cells by interacting with USP10.
Blood, 122(5):715-725, (2013).

​

Takahashi M, Higuchi M, Matsuki H, Yoshita M, Ohsawa T, Oie M, Fujii M.
Stress granules inhibit apoptosis by reducing reactive oxygen species production.
Mol Cell Biol, 33(4):815-829, (2013).

​

Matsuki H, Takahashi M, Higuchi M, Makokha GN, Oie M, Fujii M.
Both G3BP1 and G3BP2 contribute to stress granule formation.
Genes Cells, 18(2):135-146, (2013).

​

Takayuki Abe*, Ai Harashima*, Tianli Xia*, Hiroyasu Konno, Keiko Konno, Alejo Morales, Jeonghyun Ahn, Delia Gutman, and Glen N. Barber. 

STING recognition of cytoplasmic DNA instigates cellular defense. 

Mol Cell. 2013 50(1) : 5-15. *These authors contributed equally to this work.

​

2012年

​

Lokesh P. Tripathi, Hiroto Kambara, Kohji Moriishi, Eiji Morita, Takayuki Abe, Yoshio Mori, Yi-An Chen, Yoshiharu Matsuura, and Kenji Mizuguchi. 

Proteomic analysis of hepatitis C virus (HCV) core protein transfection and host regulator PA28g knockout in HCV pathogenesis:a network-based study. 

J Proteome Res. 2012 11(7) : 3664-3679.

​

Takayuki Abe, Takasuke Fukuhara, Xiaoyu Wen, Akinori Ninomiya, Kohji Moriishi, Yoshihiko Maehara, Osamu Takeuchi, Taro Kawai, Shizuo Akira, and Yoshiharu Matsuura. 

CD44 participates in IP-10 induction in cells in which hepatitis C virus RNA is replicating, through an interaction with Toll-like receptor 2 and hyaluronan. 

J Virol. 2012 86(11) : 6159-6170.

​

Chikako Kataoka, Yuuki Kaname, Shuhei Taguwa, Takayuki Abe, Takasuke Fukuhara, Hideki Tani, Kohji Moriishi, and Yoshiharu Matsuura. 

Baculovirus GP64-mediated entry into mammalian cells. 

J Virol. 2012 86(5) : 2610-2620.

​

2011年

​

Hiroshi Katoh, Yoshio Mori, Hiroto Kambara, Takayuki Abe, Takasuke Fukuhara, Eiji Morita, Kohji Moriishi, Wataru Kamitani, and Yoshiharu Matsuura. 

Heterogeneous nuclear ribonucleoprotein A2 participates in the replication of Japanese encephalitis virus through an interaction with viral proteins and RNA. 

J Virol. 2011 85(21) : 10976-10988.

​

Takasuke Fukuhara, Hideki Tani, Mai Shiokawa, Yukinori Goto, Takayuki Abe, Akinobu Taketomi, Ken Shirabe, Yoshihiko Maehara, Kohji Moriishi, and Yoshiharu Matsuura. 

Intracellular deliverly of serum-derived hepatitis C virus. 

Microbes Infect. 2011 13(4) : 405-412.

​

Hiroto Kambara, Hideki Tani, Yoshio Mori, Takayuki Abe, Hiroshi Katoh, Takasuke Fukuhara, Shuhei Taguwa, Kohji Moriishi, and Yoshiharu Matsuura. 

Involvement of cyclophilin B in the replication of Japanese encephalitis virus. 

Virology. 2011 412(1) : 211-219.

​

Xiaoyu Wen*, Takayuki Abe*, Hiroshi Kukihara, Shuhei Taguwa, Yoshio Mori, Hideki Tani, Nubuyuki Kato, Tetsuro Suzuki, Masashi Tatsumi, Kohji Moriishi, and Yoshiharu Matsuura. 

Elimination of hepatitis C virus from hepatocytes by a selective activation of therapeutic molecules. 

PLoS ONE. 2011 6(1) : e15967. *These authors contributed equally to this work.